THE MERCK MANUAL: The Merck Manual of Diagnosis and Therapy
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Contiguous Gene Syndromes

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Contiguous gene syndromes are disorders caused by microscopic and submicroscopic deletions or duplications of contiguous genes on particular parts of chromosomes. These syndromes differ from chromosomal deletion syndromes (Chromosomal Anomalies: Chromosomal Deletion Syndromes) in that deletion syndromes are usually visible on karyotyping because of their larger size (typically > 5 megabases), whereas the abnormalities in contiguous gene syndromes involve smaller segments (typically 1 to 3 megabases) and are detectable only with fluorescent probes (fluorescent in situ hybridization) and microarray analysis. A given gene segment can be deleted or duplicated (termed a reciprocal duplication). The clinical effects of microscopic reciprocal duplications tend to be similar but less severe than those of deletions involving the same segment.

Most clinically significant microdeletions and duplications seem to occur sporadically; however, mildly affected parents may be diagnosed when parental testing is done after a child is found to have an abnormality. Numerous syndromes have been identified, with widely varying manifestations (see Table 2: Chromosomal Anomalies: Examples of Contiguous Gene Deletion SyndromesTables).

Table 2

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Last full review/revision December 2012 by Nina N. Powell-Hamilton, MD

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